For an up-to-date version of this rapidly expanding publication list, please see Anne’s Google Scholar!
Year | Title | Format | Project |
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2018 | Tropical heterothermy is “cool”: The expression of daily torpor and hibernation in primates. Blanco M.B, Dausmann K.H, Faherty S.L., and A.D. Yoder. Evolutionary Anthropology. | Hibernation in Dwarf Lemurs | |
2018 | What is Speciation Genomics? The roles of ecology, gene flow, and genomic architecture in the formation of species. Campbell C.R., Poelstra J.W., and A.D. Yoder.Biological Journal of the Linnean Society. | Next Generation ‘Omics | |
2018 | Neutral Theory Is the Foundation of Conservation Genetics. Yoder A.D., Poelstra J.W., Tiley G.P., and R.C. Williams. Molecular Biology and Evolution. | Phylogenetics and Molecular Evolution | |
2018 | Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case. dos Reis M., Gunnell G.F., Barba-Montoya J., et al. Systematic Biology. | Divergence Time Estimation | |
2018 | The ecosystem services of animal microbiomes. McKenney E.A., Koelle K., Dunn R.R., and A.D. Yoder. Molecular Ecology. | The Gut Microbiome in Lemurs | |
2018 | Warning SINEs: Alu elements, evolution of the human brain, and the spectrum of neurological disease. Larsen P.L., Hunnicutt K.E., Larsen R.J., Yoder A.D., and A.M. Saunders. Chromsome Research. | Evolutionary Medicine | |
2018 | Transcriptomics in the wild: hibernation physiology in free-ranging dwarf lemurs. Faherty S.L., Villanueva-Cañas J.L., Blanco M.B., Albà M.M. and A.D. Yoder. Molecular Ecology. | Hibernation in Dwarf Lemurs | |
2017 | Bamboo specialists from two mammalian orders (Primates, Carnivora) share a high number of low-abundance gut microbes. McKenney E.A., Maslanka M., Rodrigo A., and A.D. Yoder. Microbial Ecology. | The Gut Microbiome in Lemurs | |
2017 | Feeding strategy shapes gut metagenomic enrichment and functional specialization in captive lemurs. McKenney, E.A., O’Connell, T.M., Rodrigo, A., and A.D. Yoder. Gut Microbes. | The Gut Microbiome in Lemurs | |
2017 | Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus). Larsen, P.A., Harris, R.A., Liu, Y., et al. BMC Biology. | Next Generation ‘Omics | |
2017 | Down for the count: Cryptosporidium infection depletes the gut microbiome in Coquerel’s sifakas. McKenney, E.A., Greene, L.K., Drea, C.M., and A.D. Yoder. Microbial Ecology in Health and Disease. | The Gut Microbiome in Lemurs | |
2017 | The challenges faced by living stock collections in the USA. McCluskey, K., Boundy-Mills, K., Dye, G., et al. eLife. | ||
2017 | The Alu neurodegeneration hypothesis: A primate-specific mechanism for neuronal transcription noise, mitochondrial dysfunction, and manifestation of neurodegenerative disease. Larsen, P.A., Lutz, M.W., Hunnicutt, K.E., et al. Alzheimer’s and Dementia. | Evolutionary Medicine | |
2016 | The effect of body mass and diet composition on torpor patterns in a Malagasy primate (Microcebus murinus). Faherty, S. L., Campbell, C. R., Hilbig, S. A., Yoder, A. D. Journal of Comparative Physiology B. | Hibernation in Dwarf Lemurs | |
2016 | Hibernation in a primate: does sleep occur? Blanco, M. B., Dausmann, K. H., Faherty, S. L., et al. Royal Society Open Science. | Hibernation in Dwarf Lemurs | |
2016 | Geogenetic patterns in mouse lemurs (genus Microcebus) reveal the ghosts of Madagascar’s forests past. Yoder, A.D., Campbell, C.R., Blanco, M.B., et al. Proceedings of the National Academy of Sciences. | Next Generation ‘Omics
The Impacts of Climate Change and Human Disturbance on Malagasy Biota |
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2016 | Gene expression profiling in the hibernating primate, Cheirogaleus medius. Faherty, S.L., Villanueva-Canas, J.L., Klopfer, P.H., Alba, M.M., Yoder, A.D. Genome Biology and Evolution. | Hibernation in Dwarf Lemurs | |
2016 | Implications of lemuriform extinctions for the Malagasy flora. Federmana, S., Dornburg A., Dalyc D.C., et al. Proceedings of the National Academy of Sciences, 113(18):5041-5046. | The Impacts of Climate Change and Human Disturbance on Malagasy Biota | |
2016 | Cheirogaleid diversity and evolution: big questions about small primates. Yoder, A.D., D.W. Weisrock, R.M. Rasoloarison, P.M. Kappeler. The Dwarf and Mouse Lemurs of Madagascar: Biology, Behavior and Conservation Biogeography of the Cheirogaleidae. Cambridge University Press. | Speciation Dynamics in Mouse Lemurs | |
2016 | Blood transcriptomes reveal novel parasitic zoonoses circulating in Madagascar’s lemurs. Larsen, P.A., Hayes, C.E., Williams, C.V., Junge, R.E., Razafindramanana, J., Mass, V., Rakotondrainibe, H., A.D. Yoder. Biology Letters, 12(1). | Next Generation ‘Omics | |
2015 | Evaluating whole transcriptome amplification for gene profiling experiments using RNA-Seq. Faherty, S.L., C.R. Campbell, P.A. Larsen, and A.D. Yoder. BMC Biotechnology, doi:10.1186/s12896-015-0155-7. | Next Generation ‘Omics | |
2015 | Comparative and population mitogenomic analyses of Madagascar’s extinct, giant ‘subfossil’ lemurs. Kistler, L., A. Ratan, L.R. Crowley, et al. Journal of Human Evolution, 79:45-54. | Origins of Lemurs and other Malagasy Biota | |
2015 | Phylogeography of the arid-adapted Malagasy bullfrog, Laliostoma labrosum, influenced by past connectivity and habitat stability. Pabijan, M., J.L. Brown, L.M. Chan, et al. Molecular Phylogenetics and Evolution, 92:11-24. | Link to ScienceDirect Version |
Comparative Phylogeography of Madagascar |
2015 | Alteration of the rat cecal microbiota during colonization with the helminth Hymenolepis dimunita. McKenney, E.A., L. Williamson, A.D. Yoder, et al. Gut Microbes, 6(3):182-193. | The Gut Microbiome in Lemurs | |
2015 | Patterns of gut bacterial colonization in three primate species. McKenney, E.A., A. Rodrigo, A.D. Yoder. PLoS ONE, 10(5): e0124618. | The Gut Microbiome in Lemurs | |
2015 | Assessing the utility of whole genome amplified DNA for next-generation molecular ecology. Blair, C., C.R. Campbell, and A.D. Yoder. Molecular Ecology Resources, doi: 10.111/1755-0998.12376. | Next Generation ‘Omics | |
2015 | Shifting ranges and conservation challenges for lemurs in the face of climate change. Brown, J.L., and A.D. Yoder. Ecology and Evolution, 5:1131–1142. | PDF Science Coverage | The Impacts of Climate Change and Human Disturbance on Malagasy Biota |
2015 | Multilocus phylogenetic and geospatial analyses illuminate diversification patterns and the biogeographic history of Malagasy endemic plated lizards (Gerrhosauridae: Zonosaurinae). Blair, C., B.P. Noonan, J.L. Brown, A.P. Raselimanana, M. Vences, and A.D. Yoder. Journal of Evolutionary Biology, 28:481–492. | Comparative Phylogeography of Madagascar | |
2014 | The molecular evolutionary dynamics of the vomeronasal receptor (Class 1) genes in primates: a gene family on the verge of a functional breakdown. Yoder, A.D. and P.A. Larsen. Frontiers in Neuroanatomy, 8:153. | Molecular Evoltuion of Sensory Communication | |
2014 | Extinction risks and the conservation of Madagascar’s reptiles. Jenkins, R.K.B., M.F. Tognelli, P. Bowles, et al. PLoS ONE, 9:e100173. | Comparative Phylogeography of Madagascar | |
2014 | A deep divergence time between sister species of Eidolon (Pteropodidae) with evidence for widespread panmixia. Shi, J.J., L.M. Chan, A.J. Peel, R. Lai, A.D. Yoder, and S.M. Goodman. Acta Chiropterologica, 16:279–292. | Comparative Phylogeography of Madagascar | |
2014 | Populations genetics of the Mauritian Flying Fox, Pteropus niger. Larsen, P.A., C.E. Hayes, M.A. Wilkins, Y. Gomard, R. Sookhareea, A.D. Yoder, and S.M. Goodman. Acta Chiropterologica, 16:293–300. | Comparative Phylogeography of Madagascar | |
2014 | Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution. Katzourakis, A., P. Aiewsakan, H. Jia, N.D. Wolfe, M. LeBreton, A.D. Yoder, and W.M. Switzer. Retrovirology, 11:61. | Evolutionary Medicine | |
2014 | A necessarily complex model to explain the biogeography of the amphibians and reptiles of Madagascar. Brown, J.L., A. Cameron, A.D. Yoder, and Miguel Vences. Nature Communications, 5:5056. | Historical Biogeography and Phylogeography | |
2014 | Multilocus coalescent analyses reveal the demographic history and speciation patterns of mouse lemur sister species. Blair, C., K.L. Heckman, A.L. Russell, and A.D. Yoder. BMC Evolutionary Biology, 14:57. | Speciation Dynamics in Mouse Lemurs | |
2014 | Next-generation approaches to advancing eco-immunogenomic research in critically endangered primates. Larsen, P.A., C.R. Campbell, and A.D. Yoder. Molecular Ecology Resources, 14:1198–1209. | PDF National Geographic Interview | Next Generation ‘Omics |
2014 | The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms. Larsen, P.A., A.M. Heilman, and A.D. Yoder. BMC Genomics, 15:720. |
Next Generation ‘Omics | |
2014 | The founding of Mauritian endemic coffee trees by a synchronous long-distance dispersal event. Nowak, M. D., Haller, B.C. and A.D. Yoder. Journal of Evolutionary Biology, 27(6):1229-39. | Origins of Lemurs and other Malagasy Biota | |
2014 | Theme and variations: heterothermy in mammals. Martin, S.L., and A.D. Yoder. Integrative & Comparative Biology, 54:439–442. | Hibernation in Dwarf Lemurs | |
2014 | Comparative genomics of mammalian hibernators using gene networks. Villanueva-Cañas, J.L, S.L. Faherty, A.D. Yoder, and M.M. Alba. Integrative & Comparative Biology, 54:452–462. | Hibernation in Dwarf Lemurs | |
2014 | Life history profiles for 27 strepsirrhine primate taxa generated using captive data from the Duke Lemur Center. Zehr, S.M., R.G. Roach, D. Haring, J. Taylor, F.H. Cameron, and A.D. Yoder. Scientific Data, 1:140019. | ||
2014 | Gene flow happens. Yoder, A.D.Evolutionary Anthropology, 23:15-17. | Speciation Dynamics in Mouse Lemurs | |
2014 | Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates. Yoder, A.D., L.M. Chan, M. dos Reis, P.A. Larsen, C.R. Campbell, R. Rasoloarison, M. Barrett, C. Roos, P. Kappler, J. Bielawski, and Z. Yang. Genome Biology and Evolution, 6:213-227. | Molecular Evoltuion of Sensory Communication | |
2013 | Latitude drives diversification in Madagascar’s endemic dry forest rodent Eliurus myoxinus (subfamily Nesomyinae). Shi, J.J., L.M. Chan, Z. Rakotomalala, A.M. Heilman, S.M. Goodman, and A.D. Yoder. Biological Journal of the Linnean Society, 110: 500-517 | Comparative Phylogeography of Madagascar | |
2013 | The relationship of sleep with temperature and metabolic rate in a hibernating primate. Krystal, A.D., B. Schopler, S. Kobbe, C. Williams, H. Rakatondrainibe, A.D. Yoder, and P. Klopfer. PLoS ONE, 8: e69913. | Hibernation in Dwarf Lemurs | |
2013 | Protection for trade of precious rosewood. Barrett, M.A., J.L. Brown, and A.D. Yoder. Nature, 499: 29. | The Impacts of Climate Change and Human Disturbance on Malagasy Biota | |
2013 | Review of the systematic status of Sceloporus arenicolus Degenhardt and Jones, 1972 with an estimate of divergence time. Chan, L.M., J.W. Archie, A.D. Yoder, and L.A. Fitzgerald. Zootaxa, 3664: 312-320. | ||
2013 | Two new species of mouse lemurs (Cheirogaleidae: Microcebus) from eastern Madagascar. Rasoloarison, R.M., D.W. Weisrock, A.D. Yoder, D. Rakotondravony, and P.M. Kappeler. International Journal of Primatology, 34:455-469 | Speciation Dynamics in Mouse Lemurs | |
2013 | Underground hibernation in a primate. Blanco, M.B., K.H. Dausmann, J.F. Ranaivoarisoa, and A.D. Yoder. Scientific Reports, 3: 1768. | Hibernation in Dwarf Lemurs | |
2013 | Fossils Versus Clocks. Yoder, A.D. Science, 339:656-658. | Divergence Time Estimation | |
2013 | The lemur revolution starts now: The genomic coming of age for a non-model organism.
Yoder, A.D. Molecular Phylogenetics and Evolution, 66:442-452. |
Link to ScienceDirect Version |
Next Generation ‘Omics |
2013 | Climate change, predictive modeling and lemur health: Assessing impacts of changing climate on health and conservation in Madagascar. Barrett, M.A., J.L. Brown, R.E. Junge, and A.D. Yoder. Biological Conservation, 157:409-422. | The Impacts of Climate Change and Human Disturbance on Malagasy Biota | |
2012 | Sequence data from new plastid and nuclear COSII regions resolves early diverging lineages in Coffea (Rubiaceae) Nowak, M.D., Davis, A.P. and A.D. Yoder. Systematic Botany, 37(4):995-1005. |
Origins of Lemurs and other Malagasy Biota | |
2012 | Defining spatial and temporal patterns of phylogeographic structure in Madagascar’s iguanid lizards (genus Oplurus). Chan, L.M., D. Choi, A.P. Raselimanana, H.A. Rakotondravony, and A.D. Yoder. Molecular Ecology, 21:3839-3851. | Comparative Phylogeography of Madagascar | |
2012 | Concatenation and Concordance in the Reconstruction of Mouse Lemur Phylogeny: An Empirical Demonstration of the Effect of Allele Sampling in Phylogenetics. Weisrock, D.W., S.D. Smith, L.M. Chan, K. Biebouw, P.M. Kappler, and A.D. Yoder. Molecular Biology and Evolution, 29(6):1615-1630. | Speciation Dynamics in Mouse Lemurs | |
2012 | Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Perry, G.H., P. Melsted, J. C. Marioni, Y. Wang, R. Bainer, J.K. Pickrell, K. Michelini, S. Zehr, A.D. Yoder, M. Stephens, J.K. Pritchard, and Y. Gilad. Genome Research, 22:602-610. | Next Generation ‘Omics | |
2011 | Effects of anthropogenic disturbance on indri (Indri indri) health in Madagascar. Junge, R.E., M. Barrett, and A.D. Yoder. American Journal of Primatology, 73(7):632-642. Featured article. | The Impacts of Climate Change and Human Disturbance on Malagasy Biota | |
2011 | Expression and Trans-Specific Polymorphism of Self-Incompatibility RNases in Coffea (Rubiaceae). Nowak, M.D., A. P. Davis, F. Anthony, and A. D. Yoder. PLoS ONE, 6(6):e21019. | Next Generation ‘Omics | |
2011 | Increased population sampling confirms low genetic divergence among Pteropus (Chiroptera: Pteropodidae) fruit bats of Madagascar and other western Indian Ocean islands. Chan, L. M., S. M. Goodman, M. D. Nowak, D. W. Weisrock, and A. D. Yoder. PLoS Currents: Tree of Life. | Online | Comparative Phylogeography of Madagascar |
2011 | Integrating statistical genetic and geospatial methods brings new power to phylogeography.Chan, L. M., J. L. Brown, and A. D. Yoder. Molecular Phylogenetics and Evolution, 59: 523–537. | Link to ScienceDirect Version |
Historical Biogeography and Phylogeography |
2010 | CITES designation for endangered rosewood in Madagascar. Barrett, M. A., J. L. Brown, M. K. Morikawa, J-N Labat, and A. D. Yoder. Science, 328: 1109-1110. | The Impacts of Climate Change and Human Disturbance on Malagasy Biota | |
2010 | Delimiting species without nuclear monophyly in Madagascar’s Mouse Lemurs. Weisrock, D. W., R. M. Rasoloarison, I. Fiorentino, J. M. Ralison, S. M. Goodman, P. M. Kappeler, and A. D. Yoder. PLoS ONE, 5(3): e9883. | Speciation Dynamics in Mouse Lemurs | |
2010 | Phylogeography’s past, present, and future: 10 years after Avise, 2000. M. J. Hickerson, B. C. Carstens, J. Cavender-Bares, K. A. Crandall, C. H. Graham, J. Johnson, L. Rissler, P. F. Victoriano, and A.D. Yoder. Molecular Phylogenetics and Evolution 54(1): 291-301. |
Link to ScienceDirect Version |
Historical Biogeography and Phylogeography |
2010 | Phylogeny and biogeography of western Indian Ocean Rousettus (Chiroptera: Pteropodidae). Goodman, S. M., L. M. Chan, M. D. Nowak, and A. D. Yoder. Journal of Mammalogy, 91(3): 593-606 | Comparative Phylogeography of Madagascar | |
2009 | Species delimitation in lemurs: multiple genetic loci reveal low levels of species diversity in the genus Cheirogaleus. Groeneveld, L.F., Weisrock, D.W., Rasoloarison, R., Yoder, A.D. and P.M. Kappeler. BMC Evolutionary Biology, 9:30. | Speciation Dynamics in Mouse Lemurs | |
2009 | Multiple colonisations of the Western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonised first.
O’Brien, J., Mariani, C., Olson, L.E., Russell, A.L., Say, L., Yoder, A.D. and T.J. Hayden. Mol. Phyl. & Evol., 51: 294-303. |
Link to ScienceDirect Version |
Comparative Phylogeography of Madagascar |
2009 | Geographic origins of aDNA samples and prospects for aDNA studies in the tropics. Karanth, K.P. and A.D. Yoder. In: Molecular Markers, PCR, Bioinformatics and Ancient DNA – Technology, Troubleshooting And Applications (G. Dorado, ed.) Science Publishers. | ||
2009 | Anonymous nuclear markers for Malagasy plated lizards (Zonosaurus). Noonan, B.P. and A.D. Yoder. Molecular Ecology Resources, 9:402-404. | Next Generation ‘Omics | |
2009 | Phylogeny and Evolution of Malagasy Plated Lizards. Raselimanana, A., Noonan, B.P., Karanth, P., Gauthier, J., and A.D. Yoder. Mol. Phyl. & Evol. 50: 336-344. | Link to ScienceDirect Version |
Origins of Lemurs and other Malagasy Biota |
2008 | The role of molecular genetics in sculpting the future of integrative biogeography. Riddle, BR; Dawson, MN; Hadly, EA, Hafner, D.J., Hickerson MJ, Mantooth SJ, and A.D. Yoder. Progress in Physical Geography, 32 (2): 173-202. | Historical Biogeography and Phylogeography | |
2008 | The development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs. Horvath, J., Weisrock, D., Embry, S.L., Fiorentino, Balhoff, J.P., I., Kappeler, P., Wray, G.A., Willard, H., and A.D. Yoder. Genome Research 18(3): 489-499. | Origins of Lemurs and other Malagasy Biota | |
2008 | Population genetic analysis of Myzopoda spp. (Chiroptera: Myzopodidae) in Madagascar. Russell, A.L., Goodman, S.M., Fiorentino, I., and A.D. Yoder. J. Mamm. 89 (1): 209-221. | Comparative Phylogeography of Madagascar | |
2007 | Lemurs: a Quick Guide. Yoder, A.D. Current Biology, 17 (20): 866-868. | ||
2007 | Multiple nuclear loci reveal patterns of incomplete lineage sorting and complex species history within western mouse lemurs (Microcebus).Heckman, K.L., Hanley, C.L., Rasoloarison, R. and A.D. Yoder. Mol. Phyl. & Evol. 43 (2): 353-367. | Link to ScienceDirect Version |
Speciation Dynamics in Mouse Lemurs |
2007 | Evolution of a tumorigenic property conferred by Glycophosphatidyl-inositol membrane anchors of CEA gene family members during the primate radiation. Naghibalhossaini, F., Yoder, A.D., Tobi, M., and C.P. Stanners. Molecular Biology of the Cell 18 (4): 1366-1374). | Evolutionary Medicine | |
2007 | Working at the interface of phylogenetics and population genetics: a biogeographic analysis of Triaenops spp (Chiroptera: Hipposideridae). Russell, A.L., Ranivo, J., Palkovacs, E.P., Goodman, S.M., and A.D. Yoder. Molecular Ecology, 16:839-851. | Comparative Phylogeography of Madagascar | |
2006 | Incongruence between genetic and morphological diversity in Microcebus griseorufus of Beza Mahafaly. Heckman, K. L., Rasoazanabary, E., Machlin, E., Godfrey, L.R., and A. D. Yoder. BMC Evolutionary Biology, 6:98 (16 Nov 2006). | Speciation Dynamics in Mouse Lemurs | |
2006 | Has vicariance or dispersal been the predominant biogeographic force in Madagascar?: only time will tell. Yoder, A.D. and M. Nowak. Ann. Rev. Ecol. Evol. Syst., 37:405-431. | Origins of Lemurs and other Malagasy Biota | |
2006 | A new species of Emballonura (Emballonuridae: Chiroptera) from the dry regions of Madagascar. Goodman, S.M., Cardiff, S. G., Ranivo, J., Russell, A.L. and A.D. Yoder. American . Museum Novitates, No. 3538: 1-24. | Comparative Phylogeography of Madagascar | |
2006 | Mouse lemur phylogeography revises a model of ecogeographic constraint in Madagascar. Yoder, A.D. and K. Heckman. In: Primate Biogeography: Progress and Prospects (J. Fleagle and S.M. Lehman, eds.) Kluwer Press, pp. 255 – 268. | Speciation Dynamics in Mouse Lemurs | |
2005 | The biogeography of Madagascar: where to turn when the fossils aren’t there. Yoder, A.D. Paleontological Society Papers, V. 11, 129-139. | Origins of Lemurs and other Malagasy Biota | |
2005 | Evidence from opsin genes rejects nocturnality in ancestral primates. Tan, Y., Yoder, A.D., Yamashita, N. and W.-H. Li. Proceedings of the National Academy of Sciences 102: 14712-14716. | Molecular Evolution of Sensory Communication | |
2005 | A multidimensional approach for detecting species patterns in Malagasy vertebrates. Yoder, A.D., Olson, L.E., Hanley, C., Heckman, K., Rasoloarison, R., Russell, A.L., Ranivo, J., Soarimalala, V., Karanth, K.P., Raselimanana, A.P. and S.M. Goodman. Proceedings of the National Academy of Sciences 102: 6587-6594, Suppl. 1 (invited Colloquium contribution). | Comparative Phylogeography of Madagascar | |
2005 | Ancient DNA from giant extinct lemurs verifies single origin of Malagasy primates. Karanth, P. Rakotosamimanana, B., Parsons, T.J. and A.D. Yoder. Proceedings of the National Academy of Sciences 102: 5090-5095. | Origins of Lemurs and other Malagasy Biota | |
2005 | Native Seychelles tortoises or Aldabran imports? The importance of radiocarbon dating for ancient DNA studies. Karanth, K.P., Palkovacs, E., Gerlach, J., Glaberman, S., Caccone, A., and A.D. Yoder. Amphibia-Reptilia 26(1): 116-121. | ||
2004 | Illumination of cryptic species boundaries in long-tailed shrew tenrecs (Mammalia: Tenrecidae; Microgale) provides insights into geographic variation and distributional constraints. Olson, L.E., Goodman, S., and A.D. Yoder. Biological Journal of the Linnean Society, 83:1-22. | Comparative Phylogeography of Madagascar | |
2004 | Divergence dates for Malagasy lemurs estimated from multiple gene loci: geological and evolutionary context. Yoder, A.D. and Z. Yang. Molecular Ecology, 13:757-773. | Divergence Time Estimation | |
2004 | Review of A Primer of Conservation Genetics, by Frankahm, R., Ballou, J.D. and D.A. Briscoe. Yoder, A.D. Journal of Mammalogy (info). | ||
2003 | Structure and Function of CC-Chemokine Receptor 5 Homologues Derived from Representative Primate Species and Subspecies of the Taxonomic Suborders Prosimii and Anthropoidea. Kunstman, K., Puffer, B., Korber, B., Kuiken, C., Smith, U., Kunstman, J., Stanton, J., Agy, M., Shibata, R., Yoder, A.D., Pillai, S., Doms, R., Marx, P., and S. Wolinsky. Journal of Virology, 77(22): 12310-12318. | Evolutionary Medicine | |
2003 | Origin of Malagasy Carnivora. Yoder, A.D. and J.J. Flynn. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1253-1256. | Origins of Lemurs and other Malagasy Biota | |
2003 | Phylogeny of the lemurs. Yoder, A.D. In: The Natural History of Madagascar (S. M. Goodman and J. Benstead, eds.) University of Chicago Press, pp. 1242-1247. | Origins of Lemurs and other Malagasy Biota | |
2003 | Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Yang, Z. and A.D. Yoder. Systematic Biology, 52(5):705-716. | Divergence Time Estimation | |
2003 | The phylogenetic position of genus Tarsius: whose side are you on? In: Tarsiers: Past, Present, and Future (P.C. Wright, E.L. Simons and S. Gursky, eds.) Yoder, A.D. Rutgers University Press, pp. 161-175. | Phylogenetics and Molecular Evolution | |
2003 | The phylogeny of Rosoideae (Rosaceae) based on sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA and the trnL/F region of chloroplast DNA. Eriksson, T., Hibbs, M.S., Yoder, A.D., Delwiche, C.F., and M.J. Donoghue. International Journal of Plant Sciences, 164(2):197-211. | ||
2003 | Single origin of Malagasy Carnivora from an African ancestor. Yoder, A.D., Burns, M.M., Zehr, S., Delefosse, T., Veron, G., Goodman, S.M., and J.J. Flynn. Nature, 421: 734-737. | Origins of Lemurs and other Malagasy Biota | |
2002 | Molecular evidence of reproductive isolation in sympatric sibling species of mouse lemurs. Yoder, A.D., Burns, M.M., and F. Genin. International Journal of Primatology, 23: 1335-1343. | Origins of Lemurs and other Malagasy Biota | |
2002 | Using secondary structure to identify ribosomal numts: cautionary examples from the human genome. Olson, L.E. and A.D. Yoder. Molecular Biology and Evolution, 19(1): 93-100. | Phylogenetics and Molecular Evolution | |
2002 | Ancient DNA Yoder, A.D. and T. Delefosse.. McGraw-Hill, Yearbook of Science and Technology, pp. 9-14. | ||
2001 | Failure of the ILD to determine data combinability for slow loris phylogeny. Yoder, A.D., Irwin, J.A., and B. Payseur. Systematic Biology, 50: 408-424. | Phylogenetics and Molecular Evolution | |
2001 | Ancient DNA from Megaladapis edwardsi. Yoder, A.D. Folia Primatol (Basel), 72(6):342-344. | ||
2000 | Remarkable species diversity in Malagasy mouse lemurs (Primates, Microcebus). Yoder, A.D., Rasoloarison, R., Goodman, S., Irwin, J.A., Atsalis, S. Ravosa, M.J., and J.U. Ganzhorn. Proceedings of the National Academy of Sciences, 97: 11325-11330. | Speciation Dynamics in Mouse Lemurs | |
2000 | Genetic tests of the taxonomic status of Lemur catta from the high mountain zone of the Andringtra Massif, Madagascar. Yoder, A.D., Irwin, J.A., Rakotoarisoa, S.V., and S. Goodman. Journal of Zoology, 252:1-9. | Comparative Phylogeography of Madagascar | |
2000 | Estimation of primate speciation dates using local molecular clocks. Yoder, A.D. and Z. Yang. Molecular Biology and Evolution, 17(7):1081-1090. | Divergence Time Estimation | |
1999 | Phylogeny of the Lemuridae: effects of taxon and character sampling on resolution of species relationships within Eulemur. Yoder, A.D. and J.A. Irwin. Cladistics, 15:351-361. | Phylogenetics and Molecular Evolution | |
1999 | Ancient DNA in subfossil lemurs: methodological challenges and their solutions. Yoder, A.D., Rakotosamimanana, B. and T.J. Parsons. In: Rasaminanana, H., B. Rakotosamimanana, S. Goodman and J. Ganzhorn (eds.), New Directions in Lemur Studies. Plenum Press, pp. 1-17. | ||
1999 | Estimation of the transition/transversion rate bias and species sampling. Yang, Z. and A.D. Yoder. Journal of Molecular Evolution, 48(3): 274-283. | PDF Dataset | Phylogenetics and Molecular Evolution |
1998 | Review of Introduction to the Primates, by Daris R. Swindler. Yoder, A.D. American Zoologist, 39(1):186-187. | ||
1997 | Back to the future: a synthesis of strepsirrhine systematics. Yoder, A.D. Evolutionary Anthropology, 6(1):11-22. | ||
1997 | An infinitude of connecting links. Yoder, A.D. Trends in Ecology and Evolution, 12(3):86-88. | ||
1996 | Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third position transversions. Yoder, A.D., Vilgalys, R., and M. Ruvolo. Molecular Biology and Evolution, 13(10):1339-1350. | Phylogenetics and Molecular Evolution | |
1996 | Ancient single origin for Malagasy primates. Yoder, A.D., Cartmill, M., Ruvolo, M., Smith, K., and R. Vilgalys. Proceedings of the National Academy of Sciences, 93:5122-5126. | Origins of Lemurs and other Malagasy Biota | |
1996 | The use of phylogeny for reconstructing lemuriform biogeography. Yoder, A.D. In: Biogeographie de Madagascar. (W.R. Lourenco, ed.) Editions de l’ORSTROM, Paris, pp. 245-258. | Historical Biogeography and Phylogeography | |
1994 | The relative position of the Cheirogaleidae in strepsirhine phylogeny: a comparison of morphological and molecular methods and results. Yoder, A.D. American Journal of Physical Anthropology, 94(1):25-46. | Phylogenetics and Molecular Evolution | |
1994 | Molecules and Morphology in Primate Systematics: An Introduction. Cartmill, M. and A.D. Yoder. American Journal of Physical Anthropology, 94(1):1. | Phylogenetics and Molecular Evolution | |
1994 | Molecules and Morphology in Primate Systematics. G. Conroy, M. Cartmill and A.D. Yoder. Editors. New York: Wiley-Lyss; special volume of American Journal of Physical Anthropology, 94(1). | Phylogenetics and Molecular Evolution | |
1993 | Review of Classification, Evolution, and the Nature of Biology, by Alec L. Panchen. Yoder, A.D. American Journal of Physical Anthropology, 91(4):535-537. | ||
1992 | Applications and limitations of ontogenetic comparisons for phylogeny reconstruction: the case of the strepsirhine internal carotid artery. Yoder, A.D. Journal of Human Evolution, 23:183-195. | Phylogenetics and Molecular Evolution | |
1992 | Cranial anatomy of Ignacius graybullianus and the affinities of the Plesiadapiformes. Kay, R.F., Thewissen, J.G.M. and A.D. Yoder. American Journal of Physical Anthropology 89:477-498. |